CDS

Accession Number TCMCG016C26899
gbkey CDS
Protein Id OMO53612.1
Location complement(join(28924..29310,29463..29621,29770..29871,30077..30175,30264..30437,30509..30684,30784..31222,31306..31448,31537..31643,31831..31930,32043..32250))
Organism Corchorus capsularis
locus_tag CCACVL1_28501

Protein

Length 697aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01015159.1
Definition Non-SMC condensin II complex, subunit H2-like protein [Corchorus capsularis]
Locus_tag CCACVL1_28501

EGGNOG-MAPPER Annotation

COG_category S
Description Condensin-2 complex subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11490        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000793        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006282        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045739        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051054        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:2001020        [VIEW IN EMBL-EBI]
GO:2001022        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACTAGTCACCAACACCACAACGGCGGAGATTCTGGCGGCGGTGAATTTGGGAAAGTCCACTTAGTCCAGCCGGAGCGTGATTTGGGAGCCAATTGGGAAGTCGATCTCGCCAAGAAGCTTGAAGACTATCTCTTGAAGATTTGCTCCGGTGAAATTACCGGCTCCCAAAGCGATGAGGGACATAGCTCTGTGAATTTCGCTGAAGCTGCGTTGCTGCTTCAGGGTTCCGTTCAGGTGTATAGCCGGAAAGTAGAGTATCTATACAATTTGGTTTTGCATGCTTTAGAGTATCTTTCTCAGAAGAGTCAACAGGATCAACCAGAAGGTTCATCAGTCCAGGCTGAACAAAGTGCTTCGCATTCTCGTTCAGATGAAGACAATGATCAATTTTGGGGCTTAGAGGACATCCCAGTGGAAGCAAAGATTTCATTAGATAGTTCAGCCAACAAAGAGACTTTGTTGAATCACTTTGTGAAGCCCCCTGCAAATTTAGTTGTTCTTGAAGGTGATTGCTTAGACACTTCTGGTGATGGCGGCGAATTAGAGTCCTATCTGTTGGCAACGAATGATCTCTACCAGGATTTCATTCTATTAGATCCATGTGATGCAGTAGCAGTTGACACTTATTTGAAGGGTGATGGTGTGGGTAAGGAAGAACATGGAACTCATAGGGGCAGTTCAAGACGCAAGAGCTTTCTTTCTCCCACAGGACGTTCAGGAGGGACTGCACGTAAATCATCTCAAGGAAAAAACAAGGATTTTAATGTTAATCAATCTCCTAGGGCTGATTGTAGTTTTGATGTTAATGACTGTAATATGGGGCCTGATCCTGCTGTTGCTGATGATTTTGGAAATGAAGATCATGGATTTGATATGGATGATAGATATTCAGAACCTAGAGACTTAGATGATTCAGATGATGATGATAATGATCCATGGAAACCTCTGAATCCACATGAACCTGGAAACTTGAAAGTGAGGCCTTTCAGAAAAGTAAAAGCTTTCAGAAGGACTGCAGTAAATTCTACGAAGACTATACCTATAACTACTTTGTTTCCACTGGCTAGATTGCATGGTACTATTAGTCCAGAACTTACAGAAATGTGGGAGAGGCGGCAGAATGCCTTTGAAAGACAAAAGGAGTCTAATTCTCCTCCATTATTTGAAAAGCTTCGGCTGTCACTAATTGGTCGGGAACATGGAGCCGCTGATGCTTTTGCTAATTCTGAAGAGGACGATGAAGACAATGGATACCATGGCGACGATACTGATTTTGGTGGACCAGATTTTGATATGCCAGGAAATATGTCAATGGATGAAGATTTACCTTTTCACCATGAGAAGCATGAGGATGGTGCTGCCGATTTTGGAACCAATGATATGTATGACCATGAAGATCCACTGTCTCAAGCAAGCCTGGAAGATCTCTGTCGCTCTCACCTAGATGCTCTCCTTGCCAGCATAGCTGAAAATGAGAAGCAAACAGAATTGGCTGCTCGAGTTTCATCATGGAAACAGAATATTGAGCATAACTTGGAAGAGCAGGAATCACATCCTCCATTTGATATCCATGAGTATGGTGAAAGAATTCTTGACAAATTATCACTTGAAGCTGATAGCAGAAATGCCATGCCATTTACTAATGTTGTTCAAGACCAGGAAAAGCATGATGTTGCTCGAACGTTTTCTGCACTACTCCAATTGGTAAACAATGGAGATGTTGCTTTAGACAAAAGTGGACTTCCTGGCGAGTCTGTTTGTTACACAGCTGTAAACCCCTTTCATGTCCGGCTCCTCAAGCATGAGAAGAGACGGGTGGAAACTCAACTTCGAACGTCTAAAAAAAGAGTGAAATCACCCTTAAGAAAAGAATCTACCAAGGATGAGAGGAATAAATCTTCACCAGAGAAATCTCCAACCATCAATTCAGATTCAGATTACAGTCACAGATCAACAAAGTTGTCATCACAAGCAAATTGCAAGTTCTCTGTGAAGCTTGGAAAGTTTGGTGGTGTAAGGTGCACTCCTGAAAGCAAGCGGAGACGGAGATCTCGAATTATCGAACCTGTCGACTTGCATTCTGCAGGGTGA
Protein:  
MTSHQHHNGGDSGGGEFGKVHLVQPERDLGANWEVDLAKKLEDYLLKICSGEITGSQSDEGHSSVNFAEAALLLQGSVQVYSRKVEYLYNLVLHALEYLSQKSQQDQPEGSSVQAEQSASHSRSDEDNDQFWGLEDIPVEAKISLDSSANKETLLNHFVKPPANLVVLEGDCLDTSGDGGELESYLLATNDLYQDFILLDPCDAVAVDTYLKGDGVGKEEHGTHRGSSRRKSFLSPTGRSGGTARKSSQGKNKDFNVNQSPRADCSFDVNDCNMGPDPAVADDFGNEDHGFDMDDRYSEPRDLDDSDDDDNDPWKPLNPHEPGNLKVRPFRKVKAFRRTAVNSTKTIPITTLFPLARLHGTISPELTEMWERRQNAFERQKESNSPPLFEKLRLSLIGREHGAADAFANSEEDDEDNGYHGDDTDFGGPDFDMPGNMSMDEDLPFHHEKHEDGAADFGTNDMYDHEDPLSQASLEDLCRSHLDALLASIAENEKQTELAARVSSWKQNIEHNLEEQESHPPFDIHEYGERILDKLSLEADSRNAMPFTNVVQDQEKHDVARTFSALLQLVNNGDVALDKSGLPGESVCYTAVNPFHVRLLKHEKRRVETQLRTSKKRVKSPLRKESTKDERNKSSPEKSPTINSDSDYSHRSTKLSSQANCKFSVKLGKFGGVRCTPESKRRRRSRIIEPVDLHSAG